Thursday 31 October 2013

Scientists capture most detailed picture yet of key AIDS protein

Scientists capture most detailed picture yet of key AIDS protein


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31-Oct-2013



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Contact: Mika Ono
mikaono@scripps.edu
858-784-2052
Scripps Research Institute



The finding represents a scientific feat as well as progress toward an HIV vaccine




LA JOLLA, CAOctober 31, 2013Collaborating scientists at The Scripps Research Institute (TSRI) and Weill Cornell Medical College have determined the first atomic-level structure of the tripartite HIV envelope proteinlong considered one of the most difficult targets in structural biology and of great value for medical science.

The new findings provide the most detailed picture yet of the AIDS-causing viruss complex envelope, including sites that future vaccines will try to mimic to elicit a protective immune response.

Most of the prior structural studies of this envelope complex focused on individual subunits; but weve needed the structure of the full complex to properly define the sites of vulnerability that could be targeted, for example with a vaccine, said Ian A. Wilson, the Hansen Professor of Structural Biology at TSRI, and a senior author of the new research with biologists Andrew Ward and Bridget Carragher of TSRI and John Moore of Weill Cornell.

The findings are published in two papers in Science Express, the early online edition of the journal Science, on October 31, 2013.

A Difficult Target

HIV, the human immunodeficiency virus, currently infects about 34 million people globally, 10 percent of whom are children, according to World Health Organization estimates. Although antiviral drugs are now used to manage many HIV infections, especially in developed countries, scientists have long sought a vaccine that can prevent new infections and perhaps ultimately eradicate the virus from the human population.

However, none of the HIV vaccines tested so far has come close to providing adequate protection. This failure is due largely to the challenges posed by HIVs envelope protein, known to virologists as Env.

Envs structure is so complex and delicate that scientists have had great difficulty obtaining the protein in a form that is suitable for the atomic-resolution imaging necessary to understand it.

It tends to fall apart, for example, even when its on the surface of the virus, so to study it we have to engineer it to be more stable, said Ward, who is an assistant professor in TSRIs Department of Integrative Structural and Computational Biology.

Illuminating Infection

In the current work the Weill Cornell-TSRI team was able to engineer a version of the Env trimer (three-component structure) that has the stability and other properties needed for atomic-resolution imaging, yet retains virtually all the structures found on native Env.

Using cutting-edge imaging methods, electron microscopy (spearheaded by graduate student Dmitry Lyumkis) and X-ray crystallography (led by Jean-Philippe Julien, a senior research associate in the Wilson lab), the team was then able to look at the new Env trimer. The X-ray crystallography study was the first ever of an Env trimer, and both methods resolved the trimer structure to a finer level of detail than has been reported before.

The data illuminated the complex process by which the Env trimer assembles and later undergoes radical shape changes during infection and clarified how it compares to envelope proteins on other dangerous viruses, such as flu and Ebola.

It has been a privilege for us to work with the Scripps team on this project, said Moore on behalf of the Weill Cornell group. Now we all need to harness this new knowledge to design and test next-generation trimers and see if we can induce the broadly active neutralizing antibodies an effective vaccine is going to need.

###


Other contributors to the studies, Cryo-EM structure of a fully glycosylated soluble cleaved HIV-1 envelope trimer, and Crystal structure of a soluble cleaved HIV-1 envelope trimer, included TSRIs Natalia de Val, Devin Sok, Robyn L. Stanfield and Marc C. Deller; and Weill Medical Colleges Rogier W. Sanders (also at Academic Medical Center, Amsterdam), Albert Cupo and Per-Johan Klasse. In addition to Wilson, Ward and Carragher, senior participants at TSRI included Clinton S. Potter and Dennis Burton.

The research was supported in part by the National Institutes of Health (HIVRAD P01 AI82362, CHAVI-ID UM1 AI100663, R01 AI36082, R01 AI084817, R37 AI36082, R01 AI33292), the US NIH NIGMS Biomedical Research Technology Program (GM103310) and the International AIDS Vaccine Initiative Neutralizing Antibody Consortium and Center.


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Scientists capture most detailed picture yet of key AIDS protein


[ Back to EurekAlert! ]

PUBLIC RELEASE DATE:

31-Oct-2013



[


| E-mail

]


Share Share

Contact: Mika Ono
mikaono@scripps.edu
858-784-2052
Scripps Research Institute



The finding represents a scientific feat as well as progress toward an HIV vaccine




LA JOLLA, CAOctober 31, 2013Collaborating scientists at The Scripps Research Institute (TSRI) and Weill Cornell Medical College have determined the first atomic-level structure of the tripartite HIV envelope proteinlong considered one of the most difficult targets in structural biology and of great value for medical science.

The new findings provide the most detailed picture yet of the AIDS-causing viruss complex envelope, including sites that future vaccines will try to mimic to elicit a protective immune response.

Most of the prior structural studies of this envelope complex focused on individual subunits; but weve needed the structure of the full complex to properly define the sites of vulnerability that could be targeted, for example with a vaccine, said Ian A. Wilson, the Hansen Professor of Structural Biology at TSRI, and a senior author of the new research with biologists Andrew Ward and Bridget Carragher of TSRI and John Moore of Weill Cornell.

The findings are published in two papers in Science Express, the early online edition of the journal Science, on October 31, 2013.

A Difficult Target

HIV, the human immunodeficiency virus, currently infects about 34 million people globally, 10 percent of whom are children, according to World Health Organization estimates. Although antiviral drugs are now used to manage many HIV infections, especially in developed countries, scientists have long sought a vaccine that can prevent new infections and perhaps ultimately eradicate the virus from the human population.

However, none of the HIV vaccines tested so far has come close to providing adequate protection. This failure is due largely to the challenges posed by HIVs envelope protein, known to virologists as Env.

Envs structure is so complex and delicate that scientists have had great difficulty obtaining the protein in a form that is suitable for the atomic-resolution imaging necessary to understand it.

It tends to fall apart, for example, even when its on the surface of the virus, so to study it we have to engineer it to be more stable, said Ward, who is an assistant professor in TSRIs Department of Integrative Structural and Computational Biology.

Illuminating Infection

In the current work the Weill Cornell-TSRI team was able to engineer a version of the Env trimer (three-component structure) that has the stability and other properties needed for atomic-resolution imaging, yet retains virtually all the structures found on native Env.

Using cutting-edge imaging methods, electron microscopy (spearheaded by graduate student Dmitry Lyumkis) and X-ray crystallography (led by Jean-Philippe Julien, a senior research associate in the Wilson lab), the team was then able to look at the new Env trimer. The X-ray crystallography study was the first ever of an Env trimer, and both methods resolved the trimer structure to a finer level of detail than has been reported before.

The data illuminated the complex process by which the Env trimer assembles and later undergoes radical shape changes during infection and clarified how it compares to envelope proteins on other dangerous viruses, such as flu and Ebola.

It has been a privilege for us to work with the Scripps team on this project, said Moore on behalf of the Weill Cornell group. Now we all need to harness this new knowledge to design and test next-generation trimers and see if we can induce the broadly active neutralizing antibodies an effective vaccine is going to need.

###


Other contributors to the studies, Cryo-EM structure of a fully glycosylated soluble cleaved HIV-1 envelope trimer, and Crystal structure of a soluble cleaved HIV-1 envelope trimer, included TSRIs Natalia de Val, Devin Sok, Robyn L. Stanfield and Marc C. Deller; and Weill Medical Colleges Rogier W. Sanders (also at Academic Medical Center, Amsterdam), Albert Cupo and Per-Johan Klasse. In addition to Wilson, Ward and Carragher, senior participants at TSRI included Clinton S. Potter and Dennis Burton.

The research was supported in part by the National Institutes of Health (HIVRAD P01 AI82362, CHAVI-ID UM1 AI100663, R01 AI36082, R01 AI084817, R37 AI36082, R01 AI33292), the US NIH NIGMS Biomedical Research Technology Program (GM103310) and the International AIDS Vaccine Initiative Neutralizing Antibody Consortium and Center.


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AAAS and EurekAlert! are not responsible for the accuracy of news releases posted to EurekAlert! by contributing institutions or for the use of any information through the EurekAlert! system.




Source: http://www.eurekalert.org/pub_releases/2013-10/sri-scm102613.php
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Hank Baskett and Kendra Wilkinson Expecting Second Child

"Round two. Here we go!! :)," Wilkinson, who is working with Clearblue, Tweeted.Source: http://feeds.celebritybabies.com/~r/celebrity-babies/~3/l_texGpbNS0/
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The Only Population Map You Need to Understand the World

The Only Population Map You Need to Understand the World

Which countries are emerging superpowers? Which countries are in decline? This excellent infographic of population change, country by country, explains pretty much everything you need to know about what's going to happen geopolitically in the next few decades.

Read more...


    






Source: http://feeds.gawker.com/~r/gizmodo/full/~3/F4dzvtbxNPM/the-only-population-map-you-need-to-understand-the-worl-1456137408
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Hollywood Reporter's Film Critics Pick the 20 Scariest Movies of All Time



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Referee Mario Yamasaki, judges assigned to UFC 167: St-Pierre vs. Hendricks main event


Veteran referee Mario Yamasaki will oversee November's UFC 167 main event, which features a welterweight title fight between champion Georges St-Pierre and challenger Johny Hendricks. Nevada State Athletic Commission (NSAC) officials issued the assignment during a Thursday meeting in Las Vegas.


Additionally, the trio of judges selected to score the bout cageside are Sal D'Amato, Glenn Trowbridge and Tony Weeks.


UFC 167, the UFC's 20th anniversary show, is scheduled to take place November 16, 2013 at the MGM Grand Garden Arena in Las Vegas, NV.


A winner of 11 straight fights, St-Pierre (24-2) will attempt the ninth consecutive defense of his UFC title against the hard-charging Hendricks (15-1), a former two-time NCAA Division I champion wrestler with tremendous knockout power in his left hand.


Yamasaki is one of the most veteran referees in the game, having overseen bouts since the 1990's. St-Pierre vs. Hendricks will mark his third UFC main event assignment of 2013, following Cain Velasquez vs. Antonio Silva II and Fabricio Werdum vs. Antonio Rodrigo Nogueira II.


Combined, the three judges assigned to UFC 167's main event have scored 23 UFC events thus far in 2013 -- D'Amato (14), Trowbridge (5) and Weeks (4).


D'Amato has been on the dissenting end of three split decisions in 2013 (Kelvin Gastelum vs. Uriah Hall, Ed Herman vs. Trevor Smith, and Raphael Assuncao vs. T.J. Dillashaw), while Trowbridge and Weeks have each been on the dissenting end of one split decision (Takeya Mizugaki vs. Erik Perez and Dennis Bermudez vs. Max Holloway, respectively).


Source: http://www.mmafighting.com/2013/10/31/5051788/referee-mario-yamasaki-judges-assigned-to-ufc-167-st-pierre-vs-hendricks
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Google: Samsung Galaxy Nexus won't get updated to Android 4.4 KitKat


Google Galaxy Nexus won't get updated to Android 44 KitKat


From the horse's mouth, we're hearing some unfortunate news: Google has taken to its Spanish support pages to announce that the Samsung Galaxy Nexus is not on the list of devices to receive Android 4.4 KitKat. This seems a bit odd, given the new update's focus on "the next billion" and offering solid performance to other budget devices, but at the moment things aren't looking up for owners of the phone -- or any older Nexus devices, for that matter. We've reached out to Google for clarification on this and will update you if and when we hear back.



Google Samsung Galaxy Nexus won't get updated to Android 44 KitKat


Source: http://www.engadget.com/2013/10/31/google-galaxy-nexus-kitkat/?ncid=rss_truncated
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If you've a 13-inch MacBook Pro with Retina display which has a temperamental keyboard and touchpad,

If you've a 13-inch MacBook Pro with Retina display which has a temperamental keyboard and touchpad, don't worry too much: Apple is working on a fix.

Read more...


    






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iPad Air and Retina iPad mini buyers guide

Everything you need to know before choosing your perfect iPad Air and Retina iPad mini color, capacity, carrier, and more!

There's a lot to consider before you buy or upgrade to a new tablet, even a new iPad. What's more important, portability or productivity? Can you live with an older, cheaper model or do you really new a newer, more expensive version? Which color, what capacity, and if you want cellular data, on which carrier? There's never been more to choose from, which means it's never been harder to choose!

Enter iMore's 2013 iPad buyers guide. We'll go over all the details, all the options, and help you decide on which iPad is perfect for you. And if you've already decided, just bookmark, email, Facebook, or Tweet this so we can help your friends and family and you can get on with enjoying your new iPad!

iPad evolution

Since Steve Jobs first unveiled it at a special event in 2010, the iPad has improved steadily in one way or another. The iPad 2 was thinner, lighter, and faster. The iPad 3 got a Retina display and LTE. The iPad 4 went Lightning. The iPad mini dropped back to iPad 2 tech, but in a much smaller form factor. The above chart shows the evolution of the iPad from the original to the latest Retina iPad mini and iPad Air, including pricing and capacity at launch. While what you paid for it when you got it might vary, you can check your current model and see how it compares to the ones available now.

iPad Air and Retina iPad mini: Should you upgrade?

iPad Air and Retina iPad mini: Should you upgrade?

When a new iPad hits the market - or two iPads, as is the case right now - one of the hardest decisions we face is whether or not to upgrade from and original iPad, iPad 2, iPad 3, iPad mini, or iPad 4 to the latest and greatest. If you have unlimited funds, you can just buy everything, all the time. Most of us don't, however, so we need to check out the new features of the iPad Air or Retina iPad mini, see how they compare to what we already have, and decide if the difference is worth the price of an entirely new device, a price that starts at $399 and $499 and goes well up from there. So, is there enough value to justify the cost?

How to sell - and get the most money for! - your old iPad before upgrading to an iPad Air or Retina iPad mini

How to sell and get the most money for your old iPad before upgrading to an iPad Air or Retina iPad mini

If you plan on upgrading to an iPad Air or Retina iPad mini, selling your old iPad is a no brainer. Apple products hold their resale value very well. If you've taken good care of your iPad, you should have no problem finding it a new home and putting some cash in your pocket while doing it. Selling the old really does help you afford the new. If you're not sure how to sell, or if you just want to make sure you get the most money, or save yourself the most time and effort, possible, here's everything you need to know!

iPad vs. Galaxy vs. Nexus vs. Kindle vs. Surface: Which tablet should you get?

iPad vs. Galaxy vs. Nexus vs. Kindle vs. Surface: Which tablet should you get?

Apple has flipped the tables - er, tablets - and not only managed to cram a 2048x1536 display into the 7.9-inch Retina iPad mini, but managed to cram a full-sized 9.7-inch display into the new iPad Air. But is either of them to right tablet for you? While everyone here at iMore certainly believes the iPad is still the best tablet for most people, most of the time, there are rare exceptions where an alternative tablet might suit your specific needs better. The iPad may have the best overall user experience, the highest quality apps and games, the widest range of services, the biggest selection of accessories, and the best customer support, but there are also things the iPad doesn't offer that other tablets do, like subsidized hardware pricing, digitizer support, Microsoft compatibility, or simply no Apple about them. How do you know which one is for you?

iPad Air vs. MacBook Air: Which Apple portable should you get?

iPad Air vs. MacBook Air: Which Apple portable should you get?

Apple now has two products designated as "Air", the MacBook Air, updated last June with the latest generation Intel Haswell processors, and the brand new iPad Air, introduced in October with a custom Apple A7 chipset. Both are ultra light, super thin, and incredibly long lasting, but one has a keyboard and runs OS X and the other a multitouch and iOS 7. Both can be absolutely killer on a plane, in an office, or around the house. But which one is better for you?

iPad Air vs. Retina iPad mini vs. iPad 2 vs. iPad mini: Which iPad model should you get?

iPad Air vs. Retina iPad mini vs. iPad 2 vs. iPad mini: Which iPad model should you get?

Once you're sure you're buying an iPad and now, the next step is to decide which iPad you're going to get. And this year, it's a tougher decision than ever. The new iPad Air and Retina iPad mini are identical in every way but screen size, 7.9- vs. 9.7-inches the only differentiator. If money is incredibly tight, though the old iPad 2 is a bit cheaper, and the old iPad mini, a cheaper still. No matter which one you choose, however, you'll be paying hundreds of dollars. Either a few, or a lot. So do you go with big or small, old or new? Which iPad should you get?

Silver vs. space gray: Which iPad Air and Retina iPad mini color should you get?

Silver vs. space gray: Which iPad Air and Retina iPad mini color should you get?

Unlike the pop-art inspired iPhone 5c, Apple's iPad line remains discreetly metallic when it comes to color schemes. It's not as bad as 2010, mind you, when you could have your choice of color, as long as it was black. Now you can get a silver back with white faceplate, or a space gray back with a black faceplate. And you can get either finish on either new iPad, the iPad Air or Retina iPad mini. (The space gray replaces last year's slate gray, likely because it's tougher and easier to anodize.) So which color is better for you?

16GB vs. 32GB vs. 64GB vs. 128GB: Which iPad Air or Retina iPad mini storage capacity should you get?

16GB vs. 32GB vs. 64GB vs. 128GB: Which iPad Air or Retina iPad mini storage capacity should you get?

Apple offers four different storage sized options for the new iPad Air and Retina iPad mini, ranging from a paltry 16GB to an enormous 128GB - literally 8 times the capacity! Every step up in capacity, however, comes with a matching $100 step up in price. That might seem like a pretty straightforward bit of math, but it really isn't! Figuring out how much storage you really need, and how much you can afford is really important. It's the difference between a great experience and a lot of frustration. So what's the deal?

Speed vs. reliability vs. value: Which iPad Air or Retina iPad mini carrier should you get?

Speed vs. reliability vs. value: Which iPad Air or Retina iPad mini carrier should you get?

AT&T vs. Verizon vs. Sprint vs. T-Mobile in the U.S. Rogers vs. Bell vs. TELUS in Canada. Three vs O2 vs EE vs Vodafone in the U.K. And many more around the world. Then there are various discount carriers, regionals, and MVNOs. It's a mess! How do you know which carrier will give you the fastest data speeds, or the most reliable connections, or simply the best value for your money? It all comes down to where you live, work, or go to school, and what options work best in your specific area. However, there's a lot of broad generalities that can apply. Here are some of the most important, broken down by country!

Apple Store vs. other stores: Where should you buy your iPad Air or Retina iPad mini?

So now that you know what you're getting, how about where? Carrier compatibility aside, the iPad you get will be the same, but the customer service you receive can vary greatly. Also, if you have specific loyalty rewards at a certain carrier or company, that can change the deal you get.

  • Apple Retail: If you have an Apple Retail Store in your area, you can go there, and if it's in stock, leave with your new iPad right away. They also offer help with your purchase and will even help you get set your new iPhone up free of charge. If you're worried about protecting your investment, they can also get you setup with AppleCare, and their Genius Bar can help you with hardware problems in the future. Corny as it sounds, It's not just shopping, it's an experience. Apple Retail has the best customer service in the business and it shows. There are no discounts, however, not ever. (Though your carrier discounts can still apply.

  • Apple Online: If there's no Apple Retail store near you there's also Apple Online in many countries. Again, no discounts but you're dealing directly with Apple. If there are any shortages or shipping delays, you can still order and they'll get it out to you as soon as stock allows.

  • Carrier stores and big box retailers: If you want brick-and-morter but don't have an Apple Store nearby, your carrier will often have one or several stores in your area. If you want a cellular model, drop buy or get it shipped to you. Big box and chain retailers, everything from Best Buy to the Shack to Tesco also carry iPads. If you have loyalty points or they're just super convenient, check them out as well.

Shady operators also try to sell discount iPads, sometimes devices that aren't even really iPads but cheap -- and highly breakable -- knockoffs. It goes without saying you should avoid those. Any deal too good to be true probably is. If you save money only to end up with a phone that doesn't run iOS and may not even run on your carrier you really just wasted your money.

AppleCare+ vs. insurance vs. nothing: Which iPad Air or Retina iPad mini protection plan should you get?

AppleCare+ vs. insurance vs. nothing: Which iPad Air or Retina iPad mini protection plan should you get?

If you plan on picking up a new iPad Air, a Retina iPad mini, or one of the cheaper, previous generation iPads, one of the last - but most important - things you have to decide is whether or not you'd like to get some kind of insurance to protect your investment, whether it be AppleCare+, third party, or something else. There are lots of factors that can play a part in your decision, such as how long you plan on keeping your iPad before upgrading, and how careful you are with it. Here's what you need to know!

Need more help?

If there's any detail you're still not 100% sure about, or any question you'd still love to get answered before you buy your brand new iPad Air or Retina iPad mini, we have fantastic information pages that are always kept up-to-the-minute, and amazing community forums filled with experts for you to talk with. Bookmark them and check back often! And once you've decided, let us know in the comments - which iPad did you get and why?


    






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